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Table 1 Characteristics of patient samples included in RNA-Sequencing analysis

From: The multifaceted role of vitreous hyalocytes: Orchestrating inflammation, angiomodulation and erythrophagocytosis in proliferative diabetic retinopathy

Preliminary analysis

           

Sample #

Age

Sex

DM Type

Ocular Diagnosis

VH

TRD

Relevant systemic disorders

Lens status

PVD

Previous anti-VEGF treatment

Previous PRP treatment

Cell count

RNA concentration (pg/µl)

            

+/- lysis

+/- lysis

1

83

F

NA

MP

NA

NA

asthma

phakic

no

NA

NA

90/264

71/116

68

M

II

MP

NA

NA

-

phakic

no

NA

NA

69

F

NA

MP

NA

NA

-

phakic

no

NA

NA

2

79

F

NA

MP

NA

NA

-

phakic

yes

NA

NA

94/86

104/154

68

F

NA

MP

NA

NA

-

phakic

no

NA

NA

76

F

NA

MP

NA

NA

asthma, st. p. fibromyalgia, st. p. borreliosis

phakic

no

NA

NA

78

F

NA

MP

NA

NA

-

phakic

no

NA

NA

3

61

F

NA

MH

NA

NA

-

phakic

no

NA

NA

79/139

84/11

74

F

NA

MP

NA

NA

st. p. chemotherapy for breast carcinoma, Parkinson’s

phakic

no

NA

NA

82

M

NA

MP

NA

NA

-

phakic

no

NA

NA

4

81

F

NA

MP

NA

NA

rheumatoid arthritis

pseudophakic

yes

NA

NA

139/147

43/85

67

F

NA

MP

NA

NA

-

phakic

no

NA

NA

76

F

NA

MH

NA

NA

-

phakic

no

NA

NA

Main analysis

            

Sample #

Age

Sex

DM Type

Ocular Diagnosis

VH

TRD

Relevant systemic disorders

Lens status

PVD

Previous anti-VEGF treatment

Previous PRP treatment

Cell count

RNA concentration (pg/µl)

5

77

M

II

PDR

+

+

-

phakic

no

no

yes

280

38

6

40

M

I

PDR

+

+

-

phakic

no

no

yes

2300

322

7

56

M

II

PDR

+

+

-

phakic

no

no

no

980

49

8

29

F

I

PDR

+

+

-

phakic

no

no

no

1800

82

9

66

F

II

PDR

+

-

-

pseudophakic

yes

> 3 months

yes

454

68

10

62

M

I

PDR

-

+

st. p. kidney and pancreas transplantation

pseudophakic

no

no

yes

723

64

11

63

M

II

PDR

+

+

renal insufficiency

phakic

no

no

no

1077

211

12

64

F

II

PDR

+

-

-

pseudophakic

no

no

yes

512

86

13*

79

F

II

MP

NA

NA

asthma

pseudophakic

no

NA

NA

944

109

14

72

M

NA

MP

NA

NA

-

pseudophakic

yes

NA

NA

291

142

15

73

M

NA

MP

NA

NA

-

pseudophakic

no

NA

NA

464

161

16

73

F

NA

MP

NA

NA

fibromyalgia

pseudophakic

no

NA

NA

701

73

17*

68

M

NA

MH

NA

NA

psoriasis

phakic

no

NA

NA

424

73

18

88

M

NA

MH

NA

NA

-

pseudophakic

no

NA

NA

315

301

19

78

F

NA

MH

NA

NA

st. p. giant cell arteritis, celiac disease

phakic

yes

NA

NA

550

110

20

69

M

NA

MH

NA

NA

-

phakic

no

NA

NA

164

174

21

72

F

NA

MH

NA

NA

-

pseudophakic

no

NA

NA

240

78

  1. DM, diabetes mellitus. VH, vitreous hemorrhage. TRD, tractional retinal detachment. PVD, posterior vitreous detachment. VEGF, vascular endothelial growth factor. PRP, panretinal photocoagulation. RNA, ribonucleic acid. NA, not applicable. MP, macular pucker. MH, macular hole. PDR, proliferative diabetic retinopathy. Two control samples (one MP and one MH, marked by an asterisk here) analyzed in a previous study [11] were processed anew and their newly generated transcriptional profiles compared to the data of the old sequencing batch. As no batch effect was present between the samples from the first analysis and the newly available sequencing profiles (data not shown), transcriptional data of the published control group of nine samples was processed for this study, too